Write support for anndata-zarr v3#455
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- This follows the anndata file format spec - This allows compatibility with zarr python for zarr version 3
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Bencher Report| Branch | zarr_v3 |
| Testbed | ubuntu-latest |
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Related to: #446 #452 #91
Description
This PR introduces write support for anndata objects in zarr v3 format. Integration (write, roundtrip etc.) tests are updated to test both zarr v2 and v3. Written by @Bisaloo and @Artur-man.
Similar to
scverse/anndata, the default write format is controlled usinganndataR.zarr_versionand set by, for example:There are a few number of issues needs to be resolved in
Rarrpackage to pass all the tests, which we will tackle during the PR.Supersedes #452
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